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» Automating Gene Expression Annotation for Mouse Embryo
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BMCBI
2004
162views more  BMCBI 2004»
13 years 4 months ago
Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant m
Background: Modern developmental biology relies heavily on the analysis of embryonic gene expression patterns. Investigators manually inspect hundreds or thousands of expression p...
Rajalakshmi Gurunathan, Bernard Van Emden, Sethura...
PVLDB
2008
163views more  PVLDB 2008»
13 years 4 months ago
C-DEM: a multi-modal query system for Drosophila Embryo databases
The amount of biological data publicly available has experienced an exponential growth as the technology advances. Online databases are now playing an important role as informatio...
Fan Guo, Lei Li, Christos Faloutsos, Eric P. Xing
BMEI
2009
IEEE
13 years 6 months ago
An Improved Probabilistic Model for Finding Differential Gene Expression
Abstract--Finding differentially expressed genes is a fundamental objective of a microarray experiment. Recently proposed method, PPLR, considers the probe-level measurement error ...
Li Zhang, Xuejun Liu
BMCBI
2007
133views more  BMCBI 2007»
13 years 4 months ago
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
Background: Gene expression measurements during the development of the fly Drosophila melanogaster are routinely used to find functional modules of temporally co-expressed genes. ...
Ivan G. Costa, Roland Krause, Lennart Opitz, Alexa...
BMCBI
2007
207views more  BMCBI 2007»
13 years 4 months ago
Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
Background: Many important high throughput projects use in situ hybridization and may require the analysis of images of spatial cross sections of organisms taken with cellular lev...
Manjunatha Jagalur, Chris Pal, Erik G. Learned-Mil...