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BMCBI
2010
142views more  BMCBI 2010»
13 years 5 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
BMCBI
2007
113views more  BMCBI 2007»
13 years 5 months ago
PILER-CR: Fast and accurate identification of CRISPR repeats
Background: Sequencing of prokaryotic genomes has recently revealed the presence of CRISPR elements: short, highly conserved repeats separated by unique sequences of similar lengt...
Robert C. Edgar
SOSP
2009
ACM
14 years 2 months ago
Automatically patching errors in deployed software
We present ClearView, a system for automatically patching errors in deployed software. ClearView works on stripped Windows x86 binaries without any need for source code, debugging...
Jeff H. Perkins, Sunghun Kim, Samuel Larsen, Saman...