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» Binary Counting with Chemical Reactions
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PSB
2011
8 years 10 months ago
Binary Counting with Chemical Reactions
Aleksandra P. Kharam, Hua Jiang, Marc D. Riedel
CORR
2008
Springer
117views Education» more  CORR 2008»
9 years 8 months ago
Robust Stochastic Chemical Reaction Networks and Bounded Tau-Leaping
The behavior of some stochastic chemical reaction networks is largely unaffected by slight inaccuracies in reaction rates. We formalize the robustness of state probabilities to re...
David Soloveichik
NC
2008
122views Neural Networks» more  NC 2008»
9 years 8 months ago
Computation with finite stochastic chemical reaction networks
A highly desired part of the synthetic biology toolbox is an embedded chemical microcontroller, capable of autonomously following a logic program specified by a set of instructions...
David Soloveichik, Matthew Cook, Erik Winfree, Jeh...
DAC
2011
ACM
8 years 7 months ago
Synchronous sequential computation with molecular reactions
Just as electronic systems implement computation in terms of voltage (energy per unit charge), molecular systems compute in terms of chemical concentrations (molecules per unit vo...
Hua Jiang, Marc D. Riedel, Keshab K. Parhi
DNA
2011
Springer
233views Bioinformatics» more  DNA 2011»
8 years 7 months ago
Less Haste, Less Waste: On Recycling and Its Limits in Strand Displacement Systems
We study the potential for molecule recycling in chemical reaction systems and their DNA strand displacement realizations. Recycling happens when a product of one reaction is a rea...
Anne Condon, Alan J. Hu, Ján Manuch, Chris ...
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