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BMCBI
2010
156views more  BMCBI 2010»
13 years 5 months ago
PeakAnalyzer: Genome-wide annotation of chromatin binding and modification loci
Background: Functional genomic studies involving high-throughput sequencing and tiling array applications, such as ChIP-seq and ChIP-chip, generate large numbers of experimentally...
Mali Salmon-Divon, Heidi Dvinge, Kairi Tammoja, Pa...
BMCBI
2010
142views more  BMCBI 2010»
13 years 5 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
CORR
2010
Springer
165views Education» more  CORR 2010»
13 years 5 months ago
Performance Analysis of a 60 GHz Near Gigabit System for WPAN Applications
A 60 GHz wireless Gigabit Ethernet (G.E.) communication system capable of near gigabit data rate has been developed at IETR. The realized system covers 2 GHz available bandwidth. T...
Lahatra Rakotondrainibe, Yvan Kokar, Gheorghe Zaha...
BMCBI
2007
113views more  BMCBI 2007»
13 years 5 months ago
PILER-CR: Fast and accurate identification of CRISPR repeats
Background: Sequencing of prokaryotic genomes has recently revealed the presence of CRISPR elements: short, highly conserved repeats separated by unique sequences of similar lengt...
Robert C. Edgar
PVLDB
2010
129views more  PVLDB 2010»
13 years 3 months ago
iGraph: A Framework for Comparisons of Disk-Based Graph Indexing Techniques
Graphs are of growing importance in modeling complex structures such as chemical compounds, proteins, images, and program dependence. Given a query graph Q, the subgraph isomorphi...
Wook-Shin Han, Jinsoo Lee, Minh-Duc Pham, Jeffrey ...