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» BioDIFF: An Effective Fast Change Detection Algorithm for Bi...
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DASFAA
2007
IEEE
183views Database» more  DASFAA 2007»
13 years 10 months ago
BioDIFF: An Effective Fast Change Detection Algorithm for Biological Annotations
Abstract. Warehousing heterogeneous, dynamic biological data is a key technique for biological data integration as it greatly improves performance. However, it requires complex mai...
Yang Song, Sourav S. Bhowmick, C. Forbes Dewey
DASFAA
2010
IEEE
195views Database» more  DASFAA 2010»
13 years 7 months ago
BIDEL: An XML-Based System for Effective Fast Change Detection of Genomic and Proteomic Data
Abstract. A key issue to address in biological data integration is how to detect changes to the underlying biological data sources. In this demonstration, we present a novel system...
Song Yang, Sourav S. Bhowmick
BMCBI
2006
155views more  BMCBI 2006»
13 years 4 months ago
AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...
ICDE
2010
IEEE
199views Database» more  ICDE 2010»
13 years 11 months ago
Mining mutation chains in biological sequences
— The increasing infectious disease outbreaks has led to a need for new research to better understand the disease’s origins, epidemiological features and pathogenicity caused b...
Chang Sheng, Wynne Hsu, Mong-Li Lee, Joo Chuan Ton...
BMCBI
2010
193views more  BMCBI 2010»
13 years 4 months ago
Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements
Background: Affymetrix GeneChip microarrays are popular platforms for expression profiling in two types of studies: detection of differential expression computed by p-values of t-...
Jakub Mieczkowski, Magdalena E. Tyburczy, Michal D...