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PRL
2008
79views more  PRL 2008»
13 years 4 months ago
Can graph-cutting improve microarray gene expression reconstructions?
Karl Fraser, Zidong Wang, Yongmin Li, Paul Kellam,...
IDA
2007
Springer
13 years 11 months ago
Noise Filtering and Microarray Image Reconstruction Via Chained Fouriers
Abstract. Microarrays allow biologists to determine the gene expressions for tens of thousands of genes simultaneously, however due to biological processes, the resulting microarra...
Karl Fraser, Zidong Wang, Yongmin Li, Paul Kellam,...
BMCBI
2005
88views more  BMCBI 2005»
13 years 4 months ago
Using large-scale perturbations in gene network reconstruction
Background: Recent analysis of the yeast gene network shows that most genes have few inputs, indicating that enumerative gene reconstruction methods are both useful and computatio...
Thomas MacCarthy, Andrew Pomiankowski, Robert Seym...
BMCBI
2010
176views more  BMCBI 2010»
13 years 5 months ago
Reverse engineering gene regulatory network from microarray data using linear time-variant model
nd: Gene regulatory network is an abstract mapping of gene regulations in living cells that can help to predict the system behavior of living organisms. Such prediction capability...
Mitra Kabir, Nasimul Noman, Hitoshi Iba
BMCBI
2004
108views more  BMCBI 2004»
13 years 4 months ago
Improving the scaling normalization for high-density oligonucleotide GeneChip expression microarrays
Background: Normalization is an important step for microarray data analysis to minimize biological and technical variations. Choosing a suitable approach can be critical. The defa...
Chao Lu