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» Canonical correlation analysis using within-class coupling
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BMCBI
2004
146views more  BMCBI 2004»
13 years 4 months ago
Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
Feng Gao, Barrett C. Foat, Harmen J. Bussemaker
BMCBI
2008
146views more  BMCBI 2008»
13 years 5 months ago
A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha
NETWORKING
2010
13 years 6 months ago
A Longitudinal Study of Small-Time Scaling Behavior of Internet Traffic
We carry out a longitudinal study of evolution of small-time scaling behavior of Internet traffic on the MAWI dataset spanning 8 years. MAWI dataset contains a number of anomalies ...
Himanshu Gupta, Vinay J. Ribeiro, Anirban Mahanti
BMCBI
2008
105views more  BMCBI 2008»
13 years 5 months ago
Improving the prediction of mRNA extremities in the parasitic protozoan Leishmania
Background: Leishmania and other members of the Trypanosomatidae family diverged early on in eukaryotic evolution and consequently display unique cellular properties. Their appare...
Martin Smith, Mathieu Blanchette, Barbara Papadopo...
BMCBI
2007
155views more  BMCBI 2007»
13 years 4 months ago
ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites
Background: In the last decade, techniques were established for the large scale genome-wide analysis of proteins, RNA, and metabolites, and database solutions have been developed ...
Jan Hummel, Michaela Niemann, Stefanie Wienkoop, W...