The identification of cis-regulatory elements and modules is an important step in understanding the regulation of genes. We have developed a pipeline capable of running multiple m...
Asim S. Siddiqui, Gordon Robertson, Misha Bilenky,...
We propose a method for finding CRMs in a set of co-regulated genes. Each CRM consists of a set of binding sites of transcription factors. We wish to find CRMs involving the same t...
Tias Guns, Hong Sun, Kathleen Marchal, Siegfried N...
This paper describes a safe and efficient combination of the object-based message-driven execution and shared array parallel programming models. In particular, we demonstrate how ...
Phil Miller, Aaron Becker, Laxmikant V. Kalé...
We design and implement an intensity-modulated radiation therapy (IMRT) plan generation technology that effectively and efficiently optimizes beam geometry as well as beam intens...
Shabbir Ahmed, Ozan Gozbasi, Martin W. P. Savelsbe...
In this contribution iteratively detected spatial division multiplexing is investigated under the constraint of a fixed data throughput. Existing bit loading and transmit power a...
Andreas Ahrens, Wei Liu, Soon Xin Ng, Volker K&uum...