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    NIPS
    2003
    133views Information Technology» more  NIPS 2003»
    ICA-based Clustering of Genes from Microarray Expression Data
    13 years 6 months ago
    ICA-based Clustering of Genes from Microarray Expression Data
    Download  books.nips.cc
    We propose an unsupervised methodology using independent component analysis (ICA) to cluster genes from DNA microarray data. Based on an ICA mixture model of genomic expression pa...
    Su-In Lee, Serafim Batzoglou
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    BMCBI
    2008
    142views more  BMCBI 2008»
    Genetic weighted k-means algorithm for clustering large-scale gene expression data
    13 years 5 months ago
    Genetic weighted k-means algorithm for clustering large-scale gene expression data
    Download  www.biomedcentral.com
    Background: The traditional (unweighted) k-means is one of the most popular clustering methods for analyzing gene expression data. However, it suffers three major shortcomings. It...
    Fang-Xiang Wu
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    BIOINFORMATICS
    2007
    195views more  BIOINFORMATICS 2007»
    Context-dependent clustering for dynamic cellular state modeling of microarray gene expression
    13 years 5 months ago
    Context-dependent clustering for dynamic cellular state modeling of microarray gene expression
    Download  www.stat.ucla.edu
    Motivation: High-throughput expression profiling allows researchers to study gene activities globally. Genes with similar expression profiles are likely to encode proteins that ma...
    Shinsheng Yuan, Ker-Chau Li
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    BMCBI
    2006
    136views more  BMCBI 2006»
    Metric for Measuring the Effectiveness of Clustering of DNA Microarray Expression
    13 years 5 months ago
    Metric for Measuring the Effectiveness of Clustering of DNA Microarray Expression
    Download  www.biomedcentral.com
    Background: The recent advancement of microarray technology with lower noise and better affordability makes it possible to determine expression of several thousand genes simultane...
    Raja Loganantharaj, Satish Cheepala, John Clifford
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    ACAL
    2007
    Springer
    161views Artificial Intelligence» more  ACAL 2007»
    An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity
    13 years 11 months ago
    An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity
    Download  www.cs.newcastle.edu.au
    Abstract. This paper illustrates how the Quadratic Assignment Problem (QAP) is used as a mathematical model that helps to produce a visualization of microarray data, based on the r...
    Mario Inostroza-Ponta, Alexandre Mendes, Regina Be...
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