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BMCBI
2011
13 years 21 days ago
Errors in CGAP xProfiler and cDNA DGED: the importance of library parsing and gene selection algorithms
Background: The Cancer Genome Anatomy Project (CGAP) xProfiler and cDNA Digital Gene Expression Displayer (DGED) have been made available to the scientific community over a decade...
Andrew T. Milnthorpe, Mikhail Soloviev
ISBI
2006
IEEE
14 years 6 months ago
A flexible framework for Web interfaces to image databases: supporting user-defined ontologies and links to external databases
Vocabularies to describe research findings are needed to effectively use scientific databases. As understanding of data evolves, scientists need tools for extending the vocabulari...
Josiah Johnston, Arpun Nagaraja, Harry Hochheiser,...
KSEM
2009
Springer
14 years 9 days ago
On Optimization of Predictions in Ontology-Driven Situation Awareness
Systems supporting situation awareness in large-scale control systems, such as, e. g., encountered in the domain of road traffic management, pursue the vision of allowing human ope...
Norbert Baumgartner, Wolfgang Gottesheim, Stefan M...
BMCBI
2006
199views more  BMCBI 2006»
13 years 5 months ago
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
Background: Microarray technology has become a widely accepted and standardized tool in biology. The first microarray data analysis programs were developed to support pair-wise co...
Björn Usadel, Axel Nagel, Dirk Steinhauser, Y...
CANDC
2004
ACM
13 years 5 months ago
The iProClass integrated database for protein functional analysis
Increasingly, scientists have begun to tackle gene functions and other complex regulatory processes by studying organisms at the global scales for various levels of biological org...
Cathy H. Wu, Hongzhan Huang, Anastasia N. Nikolska...