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BMCBI
2008
99views more  BMCBI 2008»
13 years 5 months ago
Multiple organism algorithm for finding ultraconserved elements
Background: Ultraconserved elements are nucleotide or protein sequences with 100% identity (no mismatches, insertions, or deletions) in the same organism or between two or more or...
Scott Christley, Neil F. Lobo, Gregory R. Madey
SOSP
2009
ACM
14 years 2 months ago
The multikernel: a new OS architecture for scalable multicore systems
Commodity computer systems contain more and more processor cores and exhibit increasingly diverse architectural tradeoffs, including memory hierarchies, interconnects, instructio...
Andrew Baumann, Paul Barham, Pierre-Évarist...
IEEEPACT
2007
IEEE
13 years 11 months ago
The OpenTM Transactional Application Programming Interface
Transactional Memory (TM) simplifies parallel programming by supporting atomic and isolated execution of user-identified tasks. To date, TM programming has required the use of l...
Woongki Baek, Chi Cao Minh, Martin Trautmann, Chri...
ICPP
2006
IEEE
13 years 11 months ago
Data Transfers between Processes in an SMP System: Performance Study and Application to MPI
— This paper focuses on the transfer of large data in SMP systems. Achieving good performance for intranode communication is critical for developing an efficient communication s...
Darius Buntinas, Guillaume Mercier, William Gropp
ICPADS
2010
IEEE
13 years 3 months ago
Data-Aware Task Scheduling on Multi-accelerator Based Platforms
To fully tap into the potential of heterogeneous machines composed of multicore processors and multiple accelerators, simple offloading approaches in which the main trunk of the ap...
Cédric Augonnet, Jérôme Clet-O...