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GECCO
2004
Springer
138views Optimization» more  GECCO 2004»
13 years 10 months ago
Comparing Genetic Programming and Evolution Strategies on Inferring Gene Regulatory Networks
Abstract. In recent years several strategies for inferring gene regulatory networks from observed time series data of gene expression have been suggested based on Evolutionary Algo...
Felix Streichert, Hannes Planatscher, Christian Sp...
GECCO
2005
Springer
180views Optimization» more  GECCO 2005»
13 years 10 months ago
Inference of gene regulatory networks using s-system and differential evolution
In this work we present an improved evolutionary method for inferring S-system model of genetic networks from the time series data of gene expression. We employed Differential Ev...
Nasimul Noman, Hitoshi Iba
NN
2007
Springer
267views Neural Networks» more  NN 2007»
13 years 4 months ago
Modeling of gene regulatory networks with hybrid differential evolution and particle swarm optimization
In the last decade, recurrent neural networks (RNNs) have attracted more efforts in inferring genetic regulatory networks (GRNs), using time series gene expression data from micro...
Rui Xu, Ganesh K. Venayagamoorthy, Donald C. Wunsc...
ICIC
2009
Springer
13 years 2 months ago
Inference of Differential Equation Models by Multi Expression Programming for Gene Regulatory Networks
This paper presents an evolutionary method for identifying the gene regulatory network from the observed time series data of gene expression using a system of ordinary differential...
Bin Yang, Yuehui Chen, Qingfang Meng
TCBB
2008
116views more  TCBB 2008»
13 years 4 months ago
Inferring Connectivity of Genetic Regulatory Networks Using Information-Theoretic Criteria
Recently, the concept of mutual information has been proposed for inferring the structure of genetic regulatory networks from gene expression profiling. After analyzing the limitat...
Wentao Zhao, Erchin Serpedin, Edward R. Dougherty