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» Comparison of Evaluation Metrics in Classification Applicati...
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NIPS
2008
13 years 6 months ago
Scalable Algorithms for String Kernels with Inexact Matching
We present a new family of linear time algorithms based on sufficient statistics for string comparison with mismatches under the string kernels framework. Our algorithms improve t...
Pavel P. Kuksa, Pai-Hsi Huang, Vladimir Pavlovic
DIS
2009
Springer
13 years 11 months ago
Contrasting Sequence Groups by Emerging Sequences
Abstract. Group comparison per se is a fundamental task in many scientific endeavours but is also the basis of any classifier. Contrast sets and emerging patterns contrast betwee...
Kang Deng, Osmar R. Zaïane
BMCBI
2008
122views more  BMCBI 2008»
13 years 4 months ago
Grammar-based distance in progressive multiple sequence alignment
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
David J. Russell, Hasan H. Otu, Khalid Sayood