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SBACPAD
2003
IEEE
120views Hardware» more  SBACPAD 2003»
13 years 10 months ago
Comparison of Genomes Using High-Performance Parallel Computing
Comparison of the DNA sequences and genes of two genomes can be useful to investigate the common functionalities of the corresponding organisms and get a better understanding of h...
Nalvo F. Almeida Jr., Carlos E. R. Alves, Edson C&...
IPPS
2005
IEEE
13 years 10 months ago
High-Performance Direct Pairwise Comparison of Large Genomic Sequences
Many applications in Comparative Genomics lend themselves to implementations that take advantage of common high-performance features in modern microprocessors. However, the common...
Christopher Mueller, Mehmet M. Dalkilic, Andrew Lu...
CCECE
2006
IEEE
13 years 11 months ago
Survey of Biological High Performance Computing: Algorithms, Implementations and Outlook Research
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
Nasreddine Hireche, J. M. Pierre Langlois, Gabriel...
IPPS
2005
IEEE
13 years 10 months ago
A Case Study on Pattern-Based Systems for High Performance Computational Biology
Computational biology research is now faced with the burgeoning number of genome data. The rigorous postprocessing of this data requires an increased role for high performance com...
Weiguo Liu, Bertil Schmidt
HPCN
1997
Springer
13 years 9 months ago
Parallel Solution of Irregular, Sparse Matrix Problems Using High Performance Fortran
For regular, sparse, linear systems, like those derived from regular grids, using High Performance Fortran (HPF) for iterative solvers is straightforward. However, for irregular ma...
Eric de Sturler, Damian Loher