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» Computational Applications of DNA Structural Scales
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ISMB
1998
13 years 5 months ago
Computational Applications of DNA Structural Scales
We study from a computational standpoint several different physicalscales associatedwith structural features of DNA sequences, including dinucleotide scales such as base stacking ...
Pierre Baldi, Søren Brunak, Yves Chauvin, A...
ISMB
2000
13 years 5 months ago
Computation and Visualization of Degenerate Repeats in Complete Genomes
The repetitive structure of genomic DNA holds many secrets to be discovered. A systematic study of repetitive DNA on a genomic or inter-genomic scale requires extensive algorithmi...
Stefan Kurtz, Enno Ohlebusch, Chris Schleiermacher...
UPP
2004
Springer
13 years 10 months ago
Design, Simulation, and Experimental Demonstration of Self-assembled DNA Nanostructures and Motors
Self-assembly is the spontaneous self-ordering of substructures into superstructures driven by the selective affinity of the substructures. DNA provides a molecular scale material...
John H. Reif, Thomas H. LaBean, Sudheer Sahu, Hao ...
IPPS
2003
IEEE
13 years 9 months ago
A Fast Algorithm for the Exhaustive Analysis of 12-Nucleotide-Long DNA Sequences. Applications to Human Genomics
We have developed a new algorithm that allows the exhaustive determination of words of up to 12 nucleotides in DNA sequences. It is fast enough as to be used at a genomic scale ru...
Vicente Arnau, Ignacio Marín
ICNC
2005
Springer
13 years 10 months ago
DNA Computing Approach to Construction of Semantic Model
In this paper, after a new DNA-based semantic model is theoretically proposed, the preliminary experiment on construction of the small test model is successfully done. This model, ...
Yusei Tsuboi, Zuwairie Ibrahim, Nobuyuki Kasai, Os...