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» Computational Quantification of Peptides from LC-MS Data
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TMI
2010
208views more  TMI 2010»
13 years 26 days ago
Patient-Specific Modeling and Quantification of the Aortic and Mitral Valves From 4-D Cardiac CT and TEE
As decisions in cardiology increasingly rely on non-invasive methods, fast and precise image processing tools have become a crucial component of the analysis workflow. To the best ...
Razvan Ioan Ionasec, Ingmar Voigt, Bogdan Georgesc...
BMCBI
2010
96views more  BMCBI 2010»
13 years 6 months ago
FluTyper-an algorithm for automated typing and subtyping of the influenza virus from high resolution mass spectral data
Background: High resolution mass spectrometry has been employed to rapidly and accurately type and subtype influenza viruses. The detection of signature peptides with unique theor...
Jason W. H. Wong, Alexander B. Schwahn, Kevin M. D...
BMCBI
2007
155views more  BMCBI 2007»
13 years 6 months ago
ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites
Background: In the last decade, techniques were established for the large scale genome-wide analysis of proteins, RNA, and metabolites, and database solutions have been developed ...
Jan Hummel, Michaela Niemann, Stefanie Wienkoop, W...
BMCBI
2005
85views more  BMCBI 2005»
13 years 6 months ago
Prediction of twin-arginine signal peptides
Background: Proteins carrying twin-arginine (Tat) signal peptides are exported into the periplasmic compartment or extracellular environment independently of the classical Secdepe...
Jannick Dyrløv Bendtsen, Henrik Nielsen, Da...
BMCBI
2011
13 years 1 months ago
ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring
Background: Since its inception, proteomics has essentially operated in a discovery mode with the goal of identifying and quantifying the maximal number of proteins in a sample. I...
Mi-Youn K. Brusniak, Sung-Tat Kwok, Mark Christian...