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BMCBI
2010
110views more  BMCBI 2010»
13 years 5 months ago
Concept-based query expansion for retrieving gene related publications from MEDLINE
Background: Advances in biotechnology and in high-throughput methods for gene analysis have contributed to an exponential increase in the number of scientific publications in thes...
Sérgio Matos, Joel Arrais, João Maia...
BMCBI
2005
152views more  BMCBI 2005»
13 years 4 months ago
CoPub Mapper: mining MEDLINE based on search term co-publication
Background: High throughput microarray analyses result in many differentially expressed genes that are potentially responsible for the biological process of interest. In order to ...
Blaise T. F. Alako, Antoine Veldhoven, Sjozef van ...
CIKM
2009
Springer
13 years 11 months ago
Mining linguistic cues for query expansion: applications to drug interaction search
Given a drug under development, what are other drugs or biochemical compounds that it might interact with? Early answers to this question, by mining the literature, are valuable f...
Sheng Guo, Naren Ramakrishnan
BMCBI
2005
152views more  BMCBI 2005»
13 years 4 months ago
Ranking the whole MEDLINE database according to a large training set using text indexing
Background: The MEDLINE database contains over 12 million references to scientific literature, ut 3/4 of recent articles including an abstract of the publication. Retrieval of ent...
Brian P. Suomela, Miguel A. Andrade
CIKM
2008
Springer
13 years 7 months ago
A system for finding biological entities that satisfy certain conditions from texts
Finding biological entities (such as genes or proteins) that satisfy certain conditions from texts is an important and challenging task in biomedical information retrieval and tex...
Wei Zhou, Clement T. Yu, Weiyi Meng