In the present work we describe architectural concepts of the distributed molecular simulation package GridMD. The main purpose of this work is to underline the construction patter...
A scalable parallel algorithm has been designed to study long-time dynamics of many-atom systems based on the nudged elastic band method, which performs mutually constrained molec...
— In this paper, we propose a novel approach to solve constrained optimization problems based on particle swarm optimization (PSO). First, an empirical comparison of the most pop...
Abstract— Developing a full-fledged cost-based XQuery optimizer is a fairly complex task. Nowadays, there is little knowledge concerning suitable cost formulae and optimization ...
Large-scale simulations and computational modeling using molecular dynamics (MD) continues to make significant impacts in the field of biology. It is well known that simulations...
Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwa...