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» Constraint Based Languages for Biological Reactions
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BMCBI
2010
126views more  BMCBI 2010»
13 years 1 months ago
Systematic integration of experimental data and models in systems biology
Background: The behaviour of biological systems can be deduced from their mathematical models. However, multiple sources of data in diverse forms are required in the construction ...
Peter Li, Joseph O. Dada, Daniel Jameson, Irena Sp...
FMCO
2005
Springer
156views Formal Methods» more  FMCO 2005»
13 years 10 months ago
On a Probabilistic Chemical Abstract Machine and the Expressiveness of Linda Languages
babilistic Chemical Abstract Machine and the Expressiveness of Linda Languages Alessandra Di Pierro1 , Chris Hankin2 , and Herbert Wiklicky2 1 Dipartimento di Informatica, Universi...
Alessandra Di Pierro, Chris Hankin, Herbert Wiklic...
ENTCS
2006
155views more  ENTCS 2006»
13 years 4 months ago
Biomolecular Agents as Multi-behavioural Concurrent Objects
In recent years, there has been increasing interest in computational models of biological systems based on various calculi of communicating processes, such as the stochastic pi-ca...
Denys Duchier, Céline Kuttler
BMCBI
2008
139views more  BMCBI 2008»
13 years 4 months ago
New challenges for text mining: mapping between text and manually curated pathways
Background: Associating literature with pathways poses new challenges to the Text Mining (TM) community. There are three main challenges to this task: (1) the identification of th...
Kanae Oda, Jin-Dong Kim, Tomoko Ohta, Daisuke Okan...
LICS
2010
IEEE
13 years 2 months ago
Abstracting the Differential Semantics of Rule-Based Models: Exact and Automated Model Reduction
ing the differential semantics of rule-based models: exact and automated model reduction (Invited Lecture) Vincent Danos∗§, J´erˆome Feret†, Walter Fontana‡, Russell Harme...
Vincent Danos, Jérôme Feret, Walter F...