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» Containment of conjunctive queries on annotated relations
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BMCBI
2005
123views more  BMCBI 2005»
13 years 5 months ago
PSI-BLAST-ISS: an intermediate sequence search tool for estimation of the position-specific alignment reliability
Background: Protein sequence alignments have become indispensable for virtually any evolutionary, structural or functional study involving proteins. Modern sequence search and com...
Mindaugas Margelevicius, Ceslovas Venclovas
NAR
2011
330views Computer Vision» more  NAR 2011»
13 years 10 days ago
Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera
The Hymenoptera Genome Database (HGD) is a comprehensive model organism database that caters to the needs of scientists working on insect species of the order Hymenoptera. This sy...
Monica C. Munoz-Torres, Justin T. Reese, Christoph...
BMCBI
2006
128views more  BMCBI 2006»
13 years 5 months ago
Comparative assessment of performance and genome dependence among phylogenetic profiling methods
Background: The rapidly increasing speed with which genome sequence data can be generated will be accompanied by an exponential increase in the number of sequenced eukaryotes. Wit...
Evan S. Snitkin, Adam M. Gustafson, Joseph C. Mell...
JAR
2006
236views more  JAR 2006»
13 years 5 months ago
Deciding Boolean Algebra with Presburger Arithmetic
We describe an algorithm for deciding the first-order multisorted theory BAPA, which combines 1) Boolean algebras of sets of uninterpreted elements (BA) and 2) Presburger arithmeti...
Viktor Kuncak, Huu Hai Nguyen, Martin C. Rinard