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» Cross-product extensions of the Gene Ontology
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NAR
2011
225views Computer Vision» more  NAR 2011»
12 years 7 months ago
Gramene database in 2010: updates and extensions
Now in its 10th year, the Gramene database (http:// www.gramene.org) has grown from its primary focus on rice, the first fully-sequenced grass genome, to become a resource for maj...
Ken Youens-Clark, Edward S. Buckler, Terry M. Cass...
BMCBI
2008
158views more  BMCBI 2008»
13 years 4 months ago
Discovering gene annotations in biomedical text databases
Currently, most of the discovered biological and biomedical knowledge is available as textual data in scientific papers. And, locating and curating information about a genomic enti...
Ali Cakmak, Gultekin Özsoyoglu
BMCBI
2005
112views more  BMCBI 2005»
13 years 4 months ago
Integration of the Gene Ontology into an object-oriented architecture
Background: To standardize gene product descriptions, a formal vocabulary defined as the Gene Ontology (GO) has been developed. GO terms have been categorized into biological proc...
Daniel Shegogue, W. Jim Zheng
NAR
2008
175views more  NAR 2008»
13 years 4 months ago
Onto-CC: a web server for identifying Gene Ontology conceptual clusters
The Gene Ontology (GO) vocabulary has been extensively explored to analyze the functions of coexpressed genes. However, despite its extended use in Biology and Medical Sciences, t...
Rocío Romero-Záliz, Coral del Val, J...
BMCBI
2004
126views more  BMCBI 2004»
13 years 4 months ago
Visualization and analysis of microarray and gene ontology data with treemaps
Background: The increasing complexity of genomic data presents several challenges for biologists. Limited computer monitor views of data complexity and the dynamic nature of data ...
Eric H. Baehrecke, Niem Dang, Ketan Babaria, Ben S...