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BMCBI
2005
246views more  BMCBI 2005»
13 years 4 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
HPCA
1995
IEEE
13 years 8 months ago
The Effects of STEF in Finely Parallel Multithreaded Processors
The throughput of a multiple-pipelined processor suffers due to lack of sufficient instructions to make multiple pipelines busy and due to delays associated with pipeline depende...
Yamin Li, Wanming Chu
HPDC
2010
IEEE
13 years 6 months ago
Towards optimising distributed data streaming graphs using parallel streams
Modern scientific collaborations have opened up the opportunity of solving complex problems that involve multidisciplinary expertise and large-scale computational experiments. The...
Chee Sun Liew, Malcolm P. Atkinson, Jano I. van He...
IPPS
2008
IEEE
13 years 11 months ago
A plug-and-play model for evaluating wavefront computations on parallel architectures
This paper develops a plug-and-play reusable LogGP model that can be used to predict the runtime and scaling behavior of different MPI-based pipelined wavefront applications runni...
Gihan R. Mudalige, Mary K. Vernon, Stephen A. Jarv...
EUROPAR
2008
Springer
13 years 6 months ago
Optimized Pipelined Parallel Merge Sort on the Cell BE
Chip multiprocessors designed for streaming applications such as Cell BE offer impressive peak performance but suffer from limited bandwidth to offchip main memory. As the number o...
Jörg Keller, Christoph W. Kessler