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» Destruction of Very Simple Trees
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BMCBI
2007
100views more  BMCBI 2007»
13 years 5 months ago
SBMLeditor: effective creation of models in the Systems Biology Markup Language (SBML)
Background: The need to build a tool to facilitate the quick creation and editing of models encoded in the Systems Biology Markup language (SBML) has been growing with the number ...
Nicolas Rodriguez, Marco Donizelli, Nicolas Le Nov...
ALMOB
2006
89views more  ALMOB 2006»
13 years 5 months ago
On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences
Given a set S of n locally aligned sequences, it is a needed prerequisite to partition it into groups of very similar sequences to facilitate subsequent computations, such as the ...
Katharina Anna Lehmann, Michael Kaufmann, Stephan ...
NECO
2006
111views more  NECO 2006»
13 years 5 months ago
Dynamics and Topographic Organization of Recursive Self-Organizing Maps
Recently, there has been an outburst of interest in extending topographic maps of vectorial data to more general data structures, such as sequences or trees. However, at present, ...
Peter Tiño, Igor Farkas, Jort van Mourik
JAIR
2007
132views more  JAIR 2007»
13 years 5 months ago
New Inference Rules for Max-SAT
Exact Max-SAT solvers, compared with SAT solvers, apply little inference at each node of the proof tree. Commonly used SAT inference rules like unit propagation produce a simpliï¬...
Chu Min Li, Felip Manyà, Jordi Planes
BMCBI
2005
306views more  BMCBI 2005»
13 years 5 months ago
A method for aligning RNA secondary structures and its application to RNA motif detection
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...