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OTM
2009
Springer
13 years 9 months ago
Detecting Inconsistencies in the Gene Ontology Using Ontology Databases with Not-gadgets
We present ontology databases with not-gadgets, a method for detecting inconsistencies in an ontology with large numbers of annotated instances by using triggers and exclusion depe...
Paea LePendu, Dejing Dou, Doug Howe
DATAMINE
2007
89views more  DATAMINE 2007»
13 years 4 months ago
Detecting inconsistency in biological molecular databases using ontologies
Qingfeng Chen, Yi-Ping Phoebe Chen, Chengqi Zhang
BMCBI
2007
129views more  BMCBI 2007»
13 years 4 months ago
Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach
Background: Incorrectly annotated sequence data are becoming more commonplace as databases increasingly rely on automated techniques for annotation. Hence, there is an urgent need...
Carson M. Andorf, Drena Dobbs, Vasant Honavar
SIGMOD
2004
ACM
88views Database» more  SIGMOD 2004»
14 years 4 months ago
Using Reasoning to Guide Annotation with Gene Ontology Terms in GOAT
High-quality annotation of biological data is central to bioinformatics. Annotation using terms from ontologies provides reliable computational access to data. The Gene Ontology (...
Michael Bada, Daniele Turi, Robin McEntire, Robert...
CORR
2010
Springer
165views Education» more  CORR 2010»
13 years 4 months ago
Detecting Ontological Conflicts in Protocols between Semantic Web Services
Abstract. The task of verifying the compatibility between interacting web services has traditionally been limited to checking the compatibility of the interaction protocol in terms...
Priyankar Ghosh, Pallab Dasgupta