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» Detecting MicroRNA Targets by Linking Sequence, MicroRNA and...
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NAR
2011
211views Computer Vision» more  NAR 2011»
12 years 9 months ago
mESAdb: microRNA Expression and Sequence Analysis Database
MicroRNA expression and sequence analysis database (http://konulab.fen.bilkent.edu.tr/mirna/) (mESAdb) is a regularly updated database for the multivariate analysis of sequences a...
Koray D. Kaya, Gökhan Karakülah, Cengiz ...
BMCBI
2010
113views more  BMCBI 2010»
13 years 6 months ago
Improving performance of mammalian microRNA target prediction
Background: MicroRNAs (miRNAs) are single-stranded non-coding RNAs known to regulate a wide range of cellular processes by silencing the gene expression at the protein and/or mRNA...
Hui Liu, Dong Yue, Yidong Chen, Shou-Jiang Gao, Yu...
BMCBI
2006
130views more  BMCBI 2006»
13 years 6 months ago
MicroTar: predicting microRNA targets from RNA duplexes
Background: The accurate prediction of a comprehensive set of messenger RNAs (targets) regulated by animal microRNAs (miRNAs) remains an open problem. In particular, the predictio...
Rahul Thadani, Martti T. Tammi
NAR
2008
127views more  NAR 2008»
13 years 6 months ago
miRBase: tools for microRNA genomics
miRBase is the central online repository for microRNA (miRNA) nomenclature, sequence data, annotation and target prediction. The current release (10.0) contains 5071 miRNA loci fr...
Sam Griffiths-Jones, Harpreet Kaur Saini, Stijn va...
ALMOB
2008
124views more  ALMOB 2008»
13 years 6 months ago
A scoring matrix approach to detecting miRNA target sites
Background: Experimental identification of microRNA (miRNA) targets is a difficult and time consuming process. As a consequence several computational prediction methods have been ...
Simon Moxon, Vincent Moulton, Jan T. Kim