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CGO
2006
IEEE
13 years 11 months ago
Selecting Software Phase Markers with Code Structure Analysis
Most programs are repetitive, where similar behavior can be seen at different execution times. Algorithms have been proposed that automatically group similar portions of a program...
Jeremy Lau, Erez Perelman, Brad Calder
BMCBI
2010
139views more  BMCBI 2010»
13 years 5 months ago
A global optimization algorithm for protein surface alignment
Background: A relevant problem in drug design is the comparison and recognition of protein binding sites. Binding sites recognition is generally based on geometry often combined w...
Paola Bertolazzi, Concettina Guerra, Giampaolo Liu...
BMCBI
2006
108views more  BMCBI 2006»
13 years 4 months ago
Promoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress
Background: In our previous studies, we found that the sites in prokaryotic genomes which are most susceptible to duplex destabilization under the negative superhelical stresses t...
Huiquan Wang, Craig J. Benham
CORR
2006
Springer
178views Education» more  CORR 2006»
13 years 4 months ago
A tool set for the quick and efficient exploration of large document collections
: We are presenting a set of multilingual text analysis tools that can help analysts in any field to explore large document collections quickly in order to determine whether the do...
Camelia Ignat, Bruno Pouliquen, Ralf Steinberger, ...
BMCBI
2007
165views more  BMCBI 2007»
13 years 4 months ago
Ab initio identification of human microRNAs based on structure motifs
Background: MicroRNAs (miRNAs) are short, non-coding RNA molecules that are directly involved in post-transcriptional regulation of gene expression. The mature miRNA sequence bind...
Markus Brameier, Carsten Wiuf