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BMCBI
2006
147views more  BMCBI 2006»
13 years 5 months ago
A case study in pathway knowledgebase verification
Background: Biological databases and pathway knowledgebases are proliferating rapidly. We are developing software tools for computer-aided hypothesis design and evaluation, and we...
Stephen A. Racunas, Nigam Shah, Nina V. Fedoroff
IJWIS
2007
153views more  IJWIS 2007»
13 years 5 months ago
A security framework for agent-based systems
Purpose – This paper aims to address some security issues in open systems such as service-oriented applications and grid computing. It proposes a security framework for these sy...
Jamal Bentahar, Francesca Toni, John-Jules Ch. Mey...
BMCBI
2005
112views more  BMCBI 2005»
13 years 5 months ago
Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds
Background: Gene expression studies increasingly compare expression responses between different experimental backgrounds (genetic, physiological, or phylogenetic). By focusing on ...
Rainer Breitling, Patrick Armengaud, Anna Amtmann
RV
2010
Springer
177views Hardware» more  RV 2010»
13 years 3 months ago
Runtime Instrumentation for Precise Flow-Sensitive Type Analysis
We describe a combination of runtime information and static analysis for checking properties of complex and configurable systems. The basic idea of our approach is to 1) let the p...
Etienne Kneuss, Philippe Suter, Viktor Kuncak
ICPPW
2009
IEEE
13 years 3 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...