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CORR
2010
Springer
174views Education» more  CORR 2010»
13 years 5 months ago
Hybrid Numerical Solution of the Chemical Master Equation
We present a numerical approximation technique for the analysis of continuous-time Markov chains that describe networks of biochemical reactions and play an important role in the ...
Thomas A. Henzinger, Maria Mateescu, Linar Mikeev,...
CMSB
2009
Springer
13 years 12 months ago
Modelling Biological Clocks with Bio-PEPA: Stochasticity and Robustness for the Neurospora crassa Circadian Network
Circadian clocks are biochemical networks, present in nearly all living organisms, whose function is to regulate the expression of specific mRNAs and proteins to synchronise rhyth...
Ozgur E. Akman, Federica Ciocchetta, Andrea Degasp...
CMPB
2010
171views more  CMPB 2010»
13 years 9 days ago
Metabolica: A statistical research tool for analyzing metabolic networks
Steady state flux balance analysis (FBA) for cellular metabolism is used, e.g., to seek information on the activity of the different pathways under equilibrium conditions, or as a...
Jenni Heino, Daniela Calvetti, Erkki Somersalo
ENTCS
2010
133views more  ENTCS 2010»
13 years 5 months ago
Towards Measurable Types for Dynamical Process Modeling Languages
Process modeling languages such as "Dynamical Grammars" are highly expressive in the processes they model using stochastic and deterministic dynamical systems, and can b...
Eric Mjolsness
ATAL
2010
Springer
13 years 6 months ago
Quasi deterministic POMDPs and DecPOMDPs
In this paper, we study a particular subclass of partially observable models, called quasi-deterministic partially observable Markov decision processes (QDET-POMDPs), characterize...
Camille Besse, Brahim Chaib-draa