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» Discrete Event Diagnosis using Petri Nets
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APBC
2004
122views Bioinformatics» more  APBC 2004»
13 years 5 months ago
Integrating Biopathway Databases for Large-scale Modeling and Simulation
Biopathway databases have been developed, such as KEGG and EcoCyc, that compile interaction structures of biopathways together with biological annotations. However, these biopathw...
Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, Sato...
SIMVIS
2003
13 years 5 months ago
An Experimental Study of the Behaviour of the Proxel-Based Simulation Algorithm
The paradigm of the proxel ("probability element") was recently introduced in order to provide a new algorithmic approach to analysing discrete-state stochastic models s...
Sanja Lazarova-Molnar, Graham Horton
HICSS
2003
IEEE
151views Biometrics» more  HICSS 2003»
13 years 9 months ago
A Simple GSPN for Modeling Common Mode Failures in Critical Infrastructures
It is now apparent that our nation’s infrastructures and essential utilities have been optimized for reliability in benign operating environments. As such, they are susceptible ...
Axel W. Krings, Paul W. Oman
BMCBI
2006
179views more  BMCBI 2006»
13 years 3 months ago
Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
Howard Salis, Vassilios Sotiropoulos, Yiannis N. K...