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» Discriminating Subsequence Discovery for Sequence Clustering
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KDD
1998
ACM
141views Data Mining» more  KDD 1998»
13 years 8 months ago
Rule Discovery from Time Series
We consider the problem of nding rules relating patterns in a time series to other patterns in that series, or patterns in one series to patterns in another series. A simple examp...
Gautam Das, King-Ip Lin, Heikki Mannila, Gopal Ren...
BMCBI
2010
121views more  BMCBI 2010»
13 years 4 months ago
Knowledge-based annotation of small molecule binding sites in proteins
Background: The study of protein-small molecule interactions is vital for understanding protein function and for practical applications in drug discovery. To benefit from the rapi...
Ratna R. Thangudu, Manoj Tyagi, Benjamin A. Shoema...
BMCBI
2006
157views more  BMCBI 2006»
13 years 4 months ago
Determination of the minimum number of microarray experiments for discovery of gene expression patterns
Background: One type of DNA microarray experiment is discovery of gene expression patterns for a cell line undergoing a biological process over a series of time points. Two import...
Fang-Xiang Wu, W. J. Zhang, Anthony J. Kusalik
BMCBI
2006
113views more  BMCBI 2006»
13 years 4 months ago
QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyp
Background: Single nucleotide polymorphisms (SNPs) are important tools in studying complex genetic traits and genome evolution. Computational strategies for SNP discovery make use...
Jifeng Tang, Ben Vosman, Roeland E. Voorrips, C. G...
BMCBI
2008
132views more  BMCBI 2008»
13 years 4 months ago
The Average Mutual Information Profile as a Genomic Signature
Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
Mark Bauer, Sheldon M. Schuster, Khalid Sayood