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TCS
2008
13 years 4 months ago
GemCell: A generic platform for modeling multi-cellular biological systems
The mass and complexity of biological information requires computer-aided simulation and analysis to help scientists achieve understanding and guide experimentation. Although livi...
Hila Amir-Kroll, Avital Sadot, Irun R. Cohen, Davi...
WSC
2004
13 years 5 months ago
Modeling and Simulation of Complex Systems with Cell-DEVS
Cell-DEVS enables efficient execution of complex cellular models. The goal of Cell-DEVS is to build discrete-event cell spaces, improving their definition by making the timing spe...
Gabriel A. Wainer
GECCO
2008
Springer
158views Optimization» more  GECCO 2008»
13 years 5 months ago
Structure and parameter estimation for cell systems biology models
In this work we present a new methodology for structure and parameter estimation in cell systems biology modelling. Our modelling framework is based on P systems, an unconl comput...
Francisco José Romero-Campero, Hongqing Cao...
BIBE
2009
IEEE
252views Bioinformatics» more  BIBE 2009»
13 years 11 months ago
Multi-Agents System to Model Cell Signalling by Using Fuzzy Cognitive Maps. Application to Computer Simulation of Multiple Myelo
—In order to simulate biological processes, we use multi-agents system. However, modelling cell behavior in systems biology is complex and may be based on intracellular biochemic...
Vincent Rodin, Gabriel Querrec, Pascal Ballet, Fra...
BMCBI
2007
103views more  BMCBI 2007»
13 years 4 months ago
Systems biology approach for mapping the response of human urothelial cells to infection by Enterococcus faecalis
Background: To better understand the response of urinary epithelial (urothelial) cells to Enterococcus faecalis, a uropathogen that exhibits resistance to multiple antibiotics, a ...
Mikhail G. Dozmorov, Kimberly D. Kyker, Ricardo Sa...