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BIOADIT
2004
Springer
13 years 10 months ago
Dynamic Self-Assembly and Computation: From Biological to Information Systems
We present two ways in which dynamic self-assembly can be used to perform computation, via stochastic protein networks and self-assembling software. We describe our protein-emulati...
Ann M. Bouchard, Gordon C. Osbourn
JCB
2006
144views more  JCB 2006»
13 years 4 months ago
Modeling Virus Self-Assembly Pathways: Avoiding Dynamics Using Geometric Constraint Decomposition
We develop a model for elucidating the assembly pathways by which an icosahedral viral shell forms from 60 identical constituent protein monomers. This poorly understood process a...
Meera Sitharam, Mavis Agbandje-Mckenna
ICECCS
2010
IEEE
162views Hardware» more  ICECCS 2010»
13 years 5 months ago
A Tile-Based Approach for Self-Assembling Service Compositions
—This paper presents a novel approach to the design of self-adaptive service-oriented applications based on a new model called service tiles. The approach allows designers to dev...
Luca Cavallaro, Elisabetta Di Nitto, Carlo A. Furi...
VRML
2004
ACM
13 years 10 months ago
PathSim visualizer: an Information-Rich Virtual Environment framework for systems biology
Increasingly, biology researchers and medical practitioners are using computational tools to model and analyze dynamic systems across scales from the macro to the cellular to the ...
Nicholas F. Polys, Doug A. Bowman, Chris North, Re...
WSC
2007
13 years 7 months ago
Combining micro and macro-modeling in DEVS for computational biology
In computational biology there is an increasing need to combine micro and macro views of the system of interest. Therefore, explicit means to describe micro and macro level and th...
Adelinde M. Uhrmacher, Roland Ewald, Mathias John,...