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BMCBI
2008
204views more  BMCBI 2008»
13 years 5 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
ISCOPE
1999
Springer
13 years 9 months ago
SIFFEA: Scalable Integrated Framework for Finite Element Analysis
SIFFEA is an automated system for parallel nite element method (PFEM) with unstructured meshes on distributed memory machines. It synthesizes mesh generator, mesh partitioner, line...
Xiangmin Jiao, Xiang-Yang Li, Xiaosong Ma
IPPS
1999
IEEE
13 years 9 months ago
An Object-Oriented Environment for Sparse Parallel Computation on Adaptive Grids
Many numerical solutions of large scale simulation models require finer discretizations in some regions of the computational grid. When this region is not known in advance, adapti...
Salvatore Filippone, Michele Colajanni, Dario Pasc...
IPPS
2010
IEEE
13 years 3 months ago
Improving the performance of Uintah: A large-scale adaptive meshing computational framework
Abstract--Uintah is a highly parallel and adaptive multiphysics framework created by the Center for Simulation of Accidental Fires and Explosions in Utah. Uintah, which is built up...
Justin Luitjens, Martin Berzins