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BMCBI
2008
118views more  BMCBI 2008»
13 years 5 months ago
PseudoGeneQuest - Service for identification of different pseudogene types in the human genome
Background: Pseudogenes, nonfunctional copies of genes, evolve fast due the lack of evolutionary pressures and thus appear in several different forms. PseudoGeneQuest is an online...
Csaba P. Ortutay, Mauno Vihinen
KDD
2009
ACM
152views Data Mining» more  KDD 2009»
14 years 6 months ago
TANGENT: a novel, 'Surprise me', recommendation algorithm
Most of recommender systems try to find items that are most relevant to the older choices of a given user. Here we focus on the "surprise me" query: A user may be bored ...
Kensuke Onuma, Hanghang Tong, Christos Faloutsos
BMCBI
2007
129views more  BMCBI 2007»
13 years 5 months ago
A novel approach to sequence validating protein expression clones with automated decision making
Background: Whereas the molecular assembly of protein expression clones is readily automated and routinely accomplished in high throughput, sequence verification of these clones i...
Elena Taycher, Andreas Rolfs, Yanhui Hu, Dongmei Z...
BMCBI
2005
189views more  BMCBI 2005»
13 years 5 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
KDD
2008
ACM
193views Data Mining» more  KDD 2008»
14 years 5 months ago
A family of dissimilarity measures between nodes generalizing both the shortest-path and the commute-time distances
This work introduces a new family of link-based dissimilarity measures between nodes of a weighted directed graph. This measure, called the randomized shortest-path (RSP) dissimil...
Luh Yen, Marco Saerens, Amin Mantrach, Masashi Shi...