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» Encodings of the Sequence Constraint
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ATVA
2010
Springer
128views Hardware» more  ATVA 2010»
13 years 6 months ago
What's Decidable about Sequences?
Abstract. We present a first-order theory of (finite) sequences with integer elements, Presburger arithmetic, and regularity constraints, which can model significant properties of ...
Carlo A. Furia
NIPS
2004
13 years 7 months ago
Discrete profile alignment via constrained information bottleneck
Amino acid profiles, which capture position-specific mutation probabilities, are a richer encoding of biological sequences than the individual sequences themselves. However, profi...
Sean O'Rourke, Gal Chechik, Robin Friedman, Eleaza...
TSP
2008
109views more  TSP 2008»
13 years 5 months ago
Code Design to Optimize Radar Detection Performance Under Accuracy and Similarity Constraints
This paper deals with the design of coded waveforms which optimize radar performances in the presence of colored Gaussian disturbance. We focus on the class of linearly coded puls...
Antonio De Maio, Silvio De Nicola, Yongwei Huang, ...
TIT
2002
91views more  TIT 2002»
13 years 5 months ago
On limited-delay lossy coding and filtering of individual sequences
Abstract--We continue the study of adaptive schemes for the sequential lossy coding of individual sequences which was recently initiated by Linder and Lugosi. Specifically, we cons...
Tsachy Weissman, Neri Merhav
BMCBI
2010
132views more  BMCBI 2010»
13 years 5 months ago
Data structures and compression algorithms for high-throughput sequencing technologies
Background: High-throughput sequencing (HTS) technologies play important roles in the life sciences by allowing the rapid parallel sequencing of very large numbers of relatively s...
Kenny Daily, Paul Rigor, Scott Christley, Xiaohui ...