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» Enhanced protein domain discovery using taxonomy
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NAR
2011
194views Computer Vision» more  NAR 2011»
12 years 8 months ago
GreenPhylDB v2.0: comparative and functional genomics in plants
GreenPhylDB is a database designed for comparative and functional genomics based on complete genomes. Version 2 now contains sixteen full genomes of members of the plantae kingdom...
Mathieu Rouard, Valentin Guignon, Christelle Aluom...
CIKM
2006
Springer
13 years 9 months ago
CP/CV: concept similarity mining without frequency information from domain describing taxonomies
Domain specific ontologies are heavily used in many applications. For instance, these form the bases on which similarity/dissimilarity between keywords are extracted for various k...
Jong Wook Kim, K. Selçuk Candan
BMCBI
2008
110views more  BMCBI 2008»
13 years 5 months ago
Enhancing the prediction of protein pairings between interacting families using orthology information
Background: It has repeatedly been shown that interacting protein families tend to have similar phylogenetic trees. These similarities can be used to predicting the mapping betwee...
José M. G. Izarzugaza, David de Juan, Carle...
NAR
2002
125views more  NAR 2002»
13 years 4 months ago
ASTRAL compendium enhancements
The ASTRAL compendium provides several databases and tools to aid in the analysis of protein structures, particularly through the use of their sequences. It is partially derived f...
John-Marc Chandonia, Nigel S. Walker, Loredana Lo ...
AIME
2005
Springer
13 years 10 months ago
Web Mining Techniques for Automatic Discovery of Medical Knowledge
In this paper, we propose an automatic and autonomous methodology to discover taxonomies of terms from the Web and represent retrieved web documents into a meaningful organization....
David Sánchez, Antonio Moreno