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BMCBI
2008
143views more  BMCBI 2008»
13 years 5 months ago
catmap: Case-control And TDT Meta-Analysis Package
Background: Risk for complex disease is thought to be controlled by multiple genetic risk factors, each with small individual effects. Meta-analyses of several independent studies...
Kristin K. Nicodemus
BMCBI
2011
13 years 10 days ago
Removing Noise From Pyrosequenced Amplicons
Background: In many environmental genomics applications a homologous region of DNA from a diverse sample is first amplified by PCR and then sequenced. The next generation sequenci...
Christopher Quince, Anders Lanzén, Russell ...
CCS
2009
ACM
14 years 4 days ago
Learning your identity and disease from research papers: information leaks in genome wide association study
Genome-wide association studies (GWAS) aim at discovering the association between genetic variations, particularly single-nucleotide polymorphism (SNP), and common diseases, which...
Rui Wang, Yong Fuga Li, XiaoFeng Wang, Haixu Tang,...
BMCBI
2011
13 years 10 days ago
Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips
Background: Illumina’s Infinium SNP BeadChips are extensively used in both small and large-scale genetic studies. A fundamental step in any analysis is the processing of raw all...
Matthew E. Ritchie, Ruijie Liu, Benilton Carvalho,...
ITCC
2005
IEEE
13 years 11 months ago
A Scalable Generative Topographic Mapping for Sparse Data Sequences
We propose a novel, computationally efficient generative topographic model for inferring low dimensional representations of high dimensional data sets, designed to exploit data s...
Ata Kabán