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    BMCBI
    2006
    119views more  BMCBI 2006»
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
    13 years 5 months ago
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
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    Background: The choice of probe set algorithms for expression summary in a GeneChip study has a great impact on subsequent gene expression data analysis. Spiked-in cRNAs with know...
    Zihua Hu, Gail R. Willsky
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    BMCBI
    2005
    178views more  BMCBI 2005»
    A quantization method based on threshold optimization for microarray short time series
    13 years 5 months ago
    A quantization method based on threshold optimization for microarray short time series
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    Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
    Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
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    BMCBI
    2005
    163views more  BMCBI 2005»
    Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data
    13 years 5 months ago
    Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data
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    Background: The evaluation of statistical significance has become a critical process in identifying differentially expressed genes in microarray studies. Classical p-value adjustm...
    Nitin Jain, HyungJun Cho, Michael O'Connell, Jae K...
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    BMCBI
    2007
    105views more  BMCBI 2007»
    Text-derived concept profiles support assessment of DNA microarray data for acute myeloid leukemia and for androgen receptor sti
    13 years 5 months ago
    Text-derived concept profiles support assessment of DNA microarray data for acute myeloid leukemia and for androgen receptor sti
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    Background: High-throughput experiments, such as with DNA microarrays, typically result in hundreds of genes potentially relevant to the process under study, rendering the interpr...
    Rob Jelier, Guido Jenster, Lambert C. J. Dorssers,...
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