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BMCBI
2010
150views more  BMCBI 2010»
13 years 5 months ago
MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure
Background: The reconstruction of protein complexes from the physical interactome of organisms serves as a building block towards understanding the higher level organization of th...
Sriganesh Srihari, Kang Ning, Hon Wai Leong
KDD
2009
ACM
189views Data Mining» more  KDD 2009»
13 years 11 months ago
CoCo: coding cost for parameter-free outlier detection
How can we automatically spot all outstanding observations in a data set? This question arises in a large variety of applications, e.g. in economy, biology and medicine. Existing ...
Christian Böhm, Katrin Haegler, Nikola S. M&u...
SIGMETRICS
2011
ACM
182views Hardware» more  SIGMETRICS 2011»
12 years 7 months ago
Fine-grained latency and loss measurements in the presence of reordering
Modern trading and cluster applications require microsecond latencies and almost no losses in data centers. This paper introduces an algorithm called FineComb that can estimate ï¬...
Myungjin Lee, Sharon Goldberg, Ramana Rao Kompella...
BMCBI
2011
12 years 12 months ago
Taxon ordering in phylogenetic trees: a workbench test
Background: Phylogenetic trees are an important tool for representing evolutionary relationships among organisms. In a phylogram or chronogram, the ordering of taxa is not conside...
Francesco Cerutti, Luigi Bertolotti, Tony L. Goldb...
BMCBI
2004
104views more  BMCBI 2004»
13 years 4 months ago
Discriminative topological features reveal biological network mechanisms
Background: Recent genomic and bioinformatic advances have motivated the development of numerous network models intending to describe graphs of biological, technological, and soci...
Manuel Middendorf, Etay Ziv, Carter Adams, Jen Hom...