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BMCBI
2006
140views more  BMCBI 2006»
13 years 6 months ago
MACSIMS : multiple alignment of complete sequences information management system
Background: In the post-genomic era, systems-level studies are being performed that seek to explain complex biological systems by integrating diverse resources from fields such as...
Julie D. Thompson, Arnaud Muller, Andrew M. Waterh...
ISSTA
2010
ACM
13 years 9 months ago
Strict control dependence and its effect on dynamic information flow analyses
Program control dependence has substantial impact on applications such as dynamic information flow tracking and data lineage tracing (a technique tracking the set of inputs that ...
Tao Bao, Yunhui Zheng, Zhiqiang Lin, Xiangyu Zhang...
BMCBI
2005
124views more  BMCBI 2005»
13 years 6 months ago
Internet-based profiler system as integrative framework to support translational research
Background: Translational research requires taking basic science observations and developing them into clinically useful tests and therapeutics. We have developed a process to dev...
Robert Kim, Francesca Demichelis, Jeffery Tang, Al...
SIGSOFT
2006
ACM
14 years 6 months ago
Dynamic slicing long running programs through execution fast forwarding
Fixing runtime bugs in long running programs using trace based analyses such as dynamic slicing was believed to be prohibitively expensive. In this paper, we present a novel execu...
Xiangyu Zhang, Sriraman Tallam, Rajiv Gupta
BMCBI
2006
99views more  BMCBI 2006»
13 years 6 months ago
Genetic algorithm learning as a robust approach to RNA editing site prediction
Background: RNA editing is one of several post-transcriptional modifications that may contribute to organismal complexity in the face of limited gene complement in a genome. One f...
James Thompson, Shuba Gopal