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ICSE
2008
IEEE-ACM
14 years 5 months ago
CodeCity: 3D visualization of large-scale software
CODECITY is a language-independent interactive 3D visualization tool for the analysis of large software systems. Using a city metaphor, it depicts classes as buildings and package...
Richard Wettel, Michele Lanza
BMCBI
2010
122views more  BMCBI 2010»
13 years 5 months ago
Genome3D: A viewer-model framework for integrating and visualizing multi-scale epigenomic information within a three-dimensional
Background: New technologies are enabling the measurement of many types of genomic and epigenomic information at scales ranging from the atomic to nuclear. Much of this new data i...
Thomas M. Asbury, Matt Mitman, Jijun Tang, W. Jim ...
BMCBI
2007
181views more  BMCBI 2007»
13 years 5 months ago
Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
Background: Macromolecular visualization as well as automated structural and functional annotation tools play an increasingly important role in the post-genomic era, contributing ...
Aleksey A. Porollo, Jaroslaw Meller
DFG
2007
Springer
13 years 11 months ago
PointCloudXplore 2: Visual Exploration of 3D Gene Expression
: To better understand how developmental regulatory networks are defined in the genome sequence, the Berkeley Drosophila Transcription Network Project (BDNTP) has developed a suit...
Oliver Rübel, Gunther H. Weber, Min-Yu Huang,...
ICWSM
2009
13 years 2 months ago
Gephi: An Open Source Software for Exploring and Manipulating Networks
Gephi is an open source software for graph and network analysis. It uses a 3D render engine to display large networks in real-time and to speed up the exploration. A flexible and ...
Mathieu Bastian, Sebastien Heymann, Mathieu Jacomy