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» Experiences with Constraint-based Array Dependence Analysis
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BMCBI
2006
128views more  BMCBI 2006»
13 years 5 months ago
Rank-statistics based enrichment-site prediction algorithm developed for chromatin immunoprecipitation on chip experiments
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
BMCBI
2005
302views more  BMCBI 2005»
13 years 4 months ago
CGHPRO - A comprehensive data analysis tool for array CGH
Background: Array CGH (Comparative Genomic Hybridisation) is a molecular cytogenetic technique for the genome wide detection of chromosomal imbalances. It is based on the cohybrid...
Wei Chen, Fikret Erdogan, H.-Hilger Ropers, Steffe...
BMCBI
2004
106views more  BMCBI 2004»
13 years 4 months ago
Spotting effect in microarray experiments
Background: Microarray data must be normalized because they suffer from multiple biases. We have identified a source of spatial experimental variability that significantly affects...
Tristan Mary-Huard, Jean-Jacques Daudin, Sté...
PPOPP
1993
ACM
13 years 9 months ago
Experiences Using the ParaScope Editor: an Interactive Parallel Programming Tool
The ParaScope Editor is an interactive parallel programming tool that assists knowledgeable users in developing scienti c Fortran programs. It displays the results of sophisticate...
Mary W. Hall, Timothy J. Harvey, Ken Kennedy, Nath...