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BMCBI
2010
143views more  BMCBI 2010»
13 years 5 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
JFP
2006
90views more  JFP 2006»
13 years 5 months ago
Regular expression filters for XML
XML data are described by types involving regular expressions. This raises the question of what language feature is convenient for manipulating such data. Previously, we have give...
Haruo Hosaya
POPL
1993
ACM
13 years 9 months ago
Graph Types
e data structures are abstractions of simple records and pointers. They impose a shape invariant, which is verified at compiletime and exploited to automatically generate code fo...
Nils Klarlund, Michael I. Schwartzbach
ECOOP
2009
Springer
14 years 6 months ago
Coinductive Type Systems for Object-Oriented Languages
We propose a novel approach based on coinductive logic to specify type systems of programming languages. The approach consists in encoding programs in Horn formulas which are inter...
Davide Ancona, Giovanni Lagorio
ACMSE
2007
ACM
13 years 9 months ago
Exploring the duality between skip lists and binary search trees
Although skip lists were introduced as an alternative to balanced binary search trees (BSTs), we show that the skip list can be interpreted as a type of randomly-balanced BST whos...
Brian C. Dean, Zachary H. Jones