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TCS
2008
13 years 4 months ago
Computation of distances for regular and context-free probabilistic languages
Several mathematical distances between probabilistic languages have been investigated in the literature, motivated by applications in language modeling, computational biology, syn...
Mark-Jan Nederhof, Giorgio Satta
UAI
2000
13 years 6 months ago
Probabilistic State-Dependent Grammars for Plan Recognition
Techniques for plan recognition under uncertainty require a stochastic model of the plangeneration process. We introduce probabilistic state-dependent grammars (PSDGs) to represen...
David V. Pynadath, Michael P. Wellman
ENTCS
2010
133views more  ENTCS 2010»
13 years 5 months ago
Towards Measurable Types for Dynamical Process Modeling Languages
Process modeling languages such as "Dynamical Grammars" are highly expressive in the processes they model using stochastic and deterministic dynamical systems, and can b...
Eric Mjolsness
BMCBI
2005
162views more  BMCBI 2005»
13 years 5 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes
BMCBI
2007
156views more  BMCBI 2007»
13 years 5 months ago
Bio: : NEXUS: a Perl API for the NEXUS format for comparative biological data
Background: Evolutionary analysis provides a formal framework for comparative analysis of genomic and other data. In evolutionary analysis, observed data are treated as the termin...
Thomas Hladish, Vivek Gopalan, Chengzhi Liang, Wei...