14 search results - page 3 / 3 » Extending assembly of short DNA sequences to handle error |
BMCBI
2010
13 years 4 months ago
2010
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
FPL
2010
Springer
13 years 2 months ago
2010
Springer
We demonstrate how Field Programmable Gate Arrays (FPGAs) may be used to address the computing challenges associated with assembling genome sequences from recent ultra-high-through...
GCB
2000
Springer
13 years 8 months ago
2000
Springer
In previous work [10], we considered algorithms related to the statistics of matches with words and regular expressions in texts generated by Bernoulli or Markov sources. In this w...
COCOON
2005
Springer
13 years 10 months ago
2005
Springer
Abstract. Phylogenetic reconstruction from gene-rearrangement data is attracting increasing attention from biologists and computer scientists. Methods used in reconstruction includ...