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FUIN
2008
80views more  FUIN 2008»
13 years 4 months ago
External Memory Algorithms for String Problems
In this paper we present external memory algorithms for some string problems. External memory algorithms have been developed in many research areas, as the speed gap between fast ...
Kangho Roh, Maxime Crochemore, Costas S. Iliopoulo...
ICDE
2011
IEEE
233views Database» more  ICDE 2011»
12 years 8 months ago
Answering approximate string queries on large data sets using external memory
— An approximate string query is to find from a collection of strings those that are similar to a given query string. Answering such queries is important in many applications su...
Alexander Behm, Chen Li, Michael J. Carey
DASFAA
2003
IEEE
151views Database» more  DASFAA 2003»
13 years 10 months ago
Approximate String Matching in DNA Sequences
Approximate string matching on large DNA sequences data is very important in bioinformatics. Some studies have shown that suffix tree is an efficient data structure for approxim...
Lok-Lam Cheng, David Wai-Lok Cheung, Siu-Ming Yiu
FTTCS
2006
132views more  FTTCS 2006»
13 years 4 months ago
Algorithms and Data Structures for External Memory
Data sets in large applications are often too massive to fit completely inside the computer's internal memory. The resulting input/output communication (or I/O) between fast ...
Jeffrey Scott Vitter
PROPERTYTESTING
2010
13 years 2 months ago
Sublinear Algorithms in the External Memory Model
We initiate the study of sublinear-time algorithms in the external memory model [Vit01]. In this model, the data is stored in blocks of a certain size B, and the algorithm is char...
Alexandr Andoni, Piotr Indyk, Krzysztof Onak, Roni...