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» Fast Computation of Reachability Labeling for Large Graphs
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CP
2003
Springer
13 years 10 months ago
A SAT-Based Approach to Multiple Sequence Alignment
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
Steven David Prestwich, Desmond G. Higgins, Orla O...
BMCBI
2008
102views more  BMCBI 2008»
13 years 5 months ago
Monitoring the evolutionary aspect of the Gene Ontology to enhance predictability and usability
Background: Much effort is currently made to develop the Gene Ontology (GO). Due to the dynamic nature of information it addresses, GO undergoes constant updates whose results are...
Jong C. Park, Tak-eun Kim, Jinah Park
BMCBI
2010
154views more  BMCBI 2010»
13 years 2 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
WWW
2007
ACM
14 years 6 months ago
Extraction and classification of dense communities in the web
The World Wide Web (WWW) is rapidly becoming important for society as a medium for sharing data, information and services, and there is a growing interest in tools for understandi...
Yon Dourisboure, Filippo Geraci, Marco Pellegrini
KDD
2008
ACM
150views Data Mining» more  KDD 2008»
14 years 5 months ago
Hypergraph spectral learning for multi-label classification
A hypergraph is a generalization of the traditional graph in which the edges are arbitrary non-empty subsets of the vertex set. It has been applied successfully to capture highord...
Liang Sun, Shuiwang Ji, Jieping Ye