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» Fast and Complete Search of siRNA Off-target Sequences
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ACCV
2007
Springer
13 years 11 months ago
Exploiting Inter-frame Correlation for Fast Video to Reference Image Alignment
Strong temporal correlation between adjacent frames of a video signal has been successfully exploited in standard video compression algorithms. In this work, we show that the tempo...
Arif Mahmood, Sohaib Khan
BMCBI
2006
116views more  BMCBI 2006»
13 years 5 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick
ICCAD
2009
IEEE
147views Hardware» more  ICCAD 2009»
13 years 3 months ago
SAT-based protein design
Computational protein design can be formulated as an optimization problem, where the objective is to identify the sequence of amino acids that minimizes the energy of a given prot...
Noah Ollikainen, Ellen Sentovich, Carlos Coelho, A...
BMCBI
2006
145views more  BMCBI 2006»
13 years 5 months ago
Querying the public databases for sequences using complex keywords contained in the feature lines
Background: High throughput technologies often require the retrieval of large data sets of sequences. Retrieval of EMBL or GenBank entries using keywords is easy using tools such ...
Olivier Croce, Michaël Lamarre, Richard Chris...
BMCBI
2006
108views more  BMCBI 2006»
13 years 5 months ago
RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits
Background: Until today, analysis of 16S ribosomal RNA (rRNA) sequences has been the de-facto gold standard for the assessment of phylogenetic relationships among prokaryotes. How...
Hanno Teeling, Frank Oliver Glöckner