Background: An important problem in genomics is the automatic inference of groups of homologous proteins from pairwise sequence similarities. Several approaches have been proposed...
ct We introduce a new family of spectral partitioning methods. Edge separators of a graph are produced by iteratively reweighting the edges until the graph disconnects into the pre...
We show how to build hierarchical, reduced-rank representation for large stochastic matrices and use this representation to design an efficient algorithm for computing the largest...
— Recent work has revealed a close connection between certain information theoretic divergence measures and properties of Mercer kernel feature spaces. Specifically, it has been...
We address the problem of determining a natural local neighbourhood or "cluster" associated to a given seed vertex in an undirected graph. We formulate the task in terms...
Pekka Orponen, Satu Elisa Schaeffer, Vanesa Avalos...