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SMA
2008
ACM
155views Solid Modeling» more  SMA 2008»
8 years 4 months ago
Filament tracking and encoding for complex biological networks
We present a framework for segmenting and storing filament networks from scalar volume data. Filament structures are commonly found in data generated using high-throughput microsc...
David Mayerich, John Keyser
VIS
2007
IEEE
188views Visualization» more  VIS 2007»
9 years 5 months ago
Fast Filament Tracking Using Graphics Hardware
Recent developments in biomedical imaging are producing massive data sets containing structures, such as fine filaments, that are difficult to visualize. In this paper, we describ...
David M. Mayerich, Zeki Melek, John Keyser
BIBE
2007
IEEE
149views Bioinformatics» more  BIBE 2007»
8 years 8 months ago
XML Encoding of Features Describing Rule-Based Modeling of Reaction Networks with Multi-Component Molecular Complexes
Multi-state molecules and multi-component complexes are commonly involved in cellular signaling. Accounting for molecules that have multiple potential states, such as a protein tha...
Michael L. Blinov, Ion I. Moraru
IJON
2002
130views more  IJON 2002»
8 years 4 months ago
Error-backpropagation in temporally encoded networks of spiking neurons
For a network of spiking neurons that encodes information in the timing of individual spike times, we derive a supervised learning rule, SpikeProp, akin to traditional errorbackpr...
Sander M. Bohte, Joost N. Kok, Johannes A. La Pout...
RECOMB
2005
Springer
9 years 4 months ago
Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations
Background: Most cellular processes are carried out by multi-protein complexes, groups of proteins that bind together to perform a specific task. Some proteins form stable complex...
Elena Zotenko, Katia S. Guimarães, Raja Jot...
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